#| #!/bin/bash
echo $HOSTNAME
export HOME=$PWD
mkdir output
mkdir cache
export XDG_CACHE_HOME=./cache
export MPLCONFIGDIR=./cache
# download AlphaFold2 weights
python -m colabfold.download

echo run test
colabfold_batch --amber --templates --num-models 1  --num-recycle 1 --jobname--prefix glucagon --zip  test.fa output

mv output/*.zip .
echo DONE