Universe   = docker
docker_image = ghcr.io/sokrypton/colabfold:1.5.5-cuda11.8.0

Executable = runaf.sh
transfer_input_files = runaf.sh, test.fa
should_transfer_files = YES
when_to_transfer_output = ON_EXIT

request_GPUs = 1
request_memory = 40 GB
request_disk = 20 GB
request_cpus = 4

batch_name = sokrypton
output = colabfold_$(batch_name).out
error = colabfold_$(batch_name).err
log = colabfold_$(batch_name).log

Queue